Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919631.1_cds_XP_016468830.1_61428
CDS Infomation

[gene=LOC107791306] [db_xref=GeneID:107791306] [protein=protein NBR1 homolog] [protein_id=XP_016468830.1] [location=join(40105..40128,41101..42341,42421..42544,42644..42895,43028..43177,43266..43793,43919..44014)] [gbkey=CDS]
Sequence

ATGGAGTCTTCTATCGTGATCAAGGTGAATTATGGAAAGACACTTAGACGATTCAATGCC
CGTGTTGCTGATGATAAACTTGGTCTTAACATGGATGGATTGAGAGACAAGATCTTTCAA
CTTTTCAACTTTGCTCCAAATACTAAACTCACACTGACATACATTGATGAGGACGGTGAT
GTTGTAACACTCGTTGATGATGAAGATCTGCAGGATATCACGAGGCAGAACCTGAATCCC
CTGCGAATATCTGTGAGATTGAATGCTAAAAAGATTATCAGATCTTCAGATGCATCTAGT
GGAAATTCTACCTCCCTGAGATCCCCAGTGGTCCAGCCTACATTTCCGAACATAAATTCG
AGTGTTTCTGATCTTCTCAAATCTTTGCCAGAATCAAAAAGCGGAAAAATCTTAAAGCAC
TCTGCAGACATGGCTGCTAAAGCCTCATCAGCTGCCCAAGAAATTGCTGAGCTTTCCAAA
TCTCTCTCGGCGATCGGCTTATCCTACTTAAAGCAGGCTTCGGGATCTCAGCCTGCCTCA
GAAACTGGCTCACAGGGTCCAGCATCTGGAATCAATACGGGTGTGACAGTGACAAAAGAC
TTAATTGGCTGTGTCGTAGATGAAACAACCTCACAAGCATTTACTAGTGTTAAAAGTGGA
GAGTCGTCCCTCAAAAAGGAAGAGCCATCCCCTGCAGAGAATGCTGAGGACGCAATCTTT
AAATTTGCAAGCCAACCCAAAAATCATACTGAATCTACAGATGCCTCAAAACTGAGATCT
TCCCAACCAGATCGGAGTGAAACTCAATGTGAATCGTTATCCAAAGATCCTAAGCCTAAC
ACATGTCTGGTTGATGTTAAGAAGGAACAAAGTAAGAAATTTGGTGATTCCCATCTTGTC
GGAAAGGCTCTTGGTATTTCGTATTCTAGTTCCTCACCCTCGGGCCTAGAAAAGGCAGCT
GATAAACAGCCAGGTGGCTCTGCAAGTTCCAATTTTGCAAAAATACTCTGGGACTCTCGT
AGTTTGGGTTGCAATGGTAGTTCATCCGATATGCTTTCAAATTGTTTTAGATCTCCAAGT
TCATATCTCATGACTGGGGTGCCTTTGGCAAAAGACACTGTGCTGCCTCAATACTCTCCT
TTTGAGATACCATTTAAAAGGAACCATAATCACAGTGATGGGGCAGCAACAACTTTTCAT
AGAGGTGTTCGTTGTGATGGTTGTGGGGTTCATCCTATAACTGGCCCTAGGTTCAAATCT
AAAGTAAAGGAGGACTATGATCTCTGCAGCATATGCTTTGCACAAATGGGAAATGATGTT
GATTACATCAGAATGGATCGTCCTGTTACTTACCAGCATCCCTTAGCTTTCAAGGGTTTA
TATGATCCTAATGGGTGGATGCGCTCCCCTACCGTTCCACAAGTATCTCAAGGCTGTGGG
TTGAAATCGGGTCGACCTAAGCTGGACAGCTGCTTCATAGAGGATGTCAGTGTACTTGAT
GGCAGTATCATGGCTCCTTCGTCTCCATTTATCAAGATCTGGAGAATGAGGAACAATGGT
AATATTGTCTGGCCAAAAGGAACAAAACTTGTTTGGATTGGGGGAGATAGATTATGTGAT
GCATGCTCTGTTGACTTACAGATTACTTCGGATGGCTTGGCGGTTAACCAGGAGCTTGAT
GTGGCAGTTATTTTTACTGCTCCTGAGCTTCCTGGTAAGTACATCTCCTACTGGAGGATG
GCCTCACCTTCAGGGCAAAACTTTGGTCAGCGTGTATGGGTGCTTATCCAGGTTGATCCC
TCGGTGAACCTTCCAAAAAAGGAGTTGTTTGATGAATCCTCTCAGTACTTGAACTTGAAT
TTCCCTCCGGCCAGCAGTGGCGTAGATGGACCTGAACTCTCAAACCCAACCATGGGGTTG
GTTGAGCCAGTGGTTGCTGGAAACCCAATTAAGGAGCAGGAGGAATCCAAGCCAAGCATT
AATGATAGCTTGTTAACTGTTGTTGGTGACAAGTCGAGCGTCTCTCCTTCAGCACCTGGT
TCATCAATTTCAAATCCCATTGATTTATCTGAGGAAGCACCAGCTGTTACTTCTGCTACA
CCACCCTCTGTTACTGAGATGCAGGCATCTTCACAGGATGTTAGAAGAAACAGTGACGTT
GAGGCGACCCTCCTCAAGGAACTGGAGGAGATGGGTTTCAAACAGGTAGACTTAAACAAA
GAAATCTTGAGGATGAACGAGTATGACTTGGAACAGGCAGTTGATGATCTTTGCGGTGTT
GCCGACTGGGATCCTATCCTTGAAGAGCTGGAGGAGATGGGTTTCCACAACCAAGAGATG
AACAGGAAGCTACTTAAGAAGAATAATGGAAGTATCAAGCGTGTTGTGATGGATCTTATT
GCTGGAGAAAATTAG

Peptide Sequence

PEP ID

XP_016468830.1
PEP Infomation

PREDICTED: protein NBR1 homolog [Nicotiana tabacum]
Sequence

MESSIVIKVNYGKTLRRFNARVADDKLGLNMDGLRDKIFQLFNFAPNTKLTLTYIDEDGD
VVTLVDDEDLQDITRQNLNPLRISVRLNAKKIIRSSDASSGNSTSLRSPVVQPTFPNINS
SVSDLLKSLPESKSGKILKHSADMAAKASSAAQEIAELSKSLSAIGLSYLKQASGSQPAS
ETGSQGPASGINTGVTVTKDLIGCVVDETTSQAFTSVKSGESSLKKEEPSPAENAEDAIF
KFASQPKNHTESTDASKLRSSQPDRSETQCESLSKDPKPNTCLVDVKKEQSKKFGDSHLV
GKALGISYSSSSPSGLEKAADKQPGGSASSNFAKILWDSRSLGCNGSSSDMLSNCFRSPS
SYLMTGVPLAKDTVLPQYSPFEIPFKRNHNHSDGAATTFHRGVRCDGCGVHPITGPRFKS
KVKEDYDLCSICFAQMGNDVDYIRMDRPVTYQHPLAFKGLYDPNGWMRSPTVPQVSQGCG
LKSGRPKLDSCFIEDVSVLDGSIMAPSSPFIKIWRMRNNGNIVWPKGTKLVWIGGDRLCD
ACSVDLQITSDGLAVNQELDVAVIFTAPELPGKYISYWRMASPSGQNFGQRVWVLIQVDP
SVNLPKKELFDESSQYLNLNFPPASSGVDGPELSNPTMGLVEPVVAGNPIKEQEESKPSI
NDSLLTVVGDKSSVSPSAPGSSISNPIDLSEEAPAVTSATPPSVTEMQASSQDVRRNSDV
EATLLKELEEMGFKQVDLNKEILRMNEYDLEQAVDDLCGVADWDPILEELEEMGFHNQEM
NRKLLKKNNGSIKRVVMDLIAGEN

Transcript Sequence

Gene sequence data has not been registered.